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Transcript_contig_56836 (56836)


Aliases : 56836

Description : PAS domain [Interproscan].


Gene families : OG_01_0000313 (OrthoFinder) Phylogenetic Tree(s): OG0000313_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_56836
Cluster HCCA: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
EOD12864 No alias Hypothetical protein [Ensembl]. 0.01 OrthoFinder
PTI_22G01390.1 No alias PAS domain; Basic-leucine zipper domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
InterPro domains Description Start Stop
IPR000014 PAS 249 275
IPR000014 PAS 80 176
No external refs found!