Transcript_contig_56766 (56766)

Aliases : 56766

Description : Carbohydrate binding module family 20 [Interproscan].

Gene families : OG_01_0000144 (OrthoFinder) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Transcript_contig_56766
Cluster	HCCA: Cluster_85

Target	Alias	Description	ECC score	Gene Family Method	Actions
SymbC1.scaffold1606.1	1606.1	Carbohydrate binding module family 20 [Interproscan].	0.01	OrthoFinder
Transcript_contig_78551	78551	Carbohydrate binding module family 20 [Interproscan].	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0030246	carbohydrate binding	None	Extended
MF	GO:0030247	polysaccharide binding	None	Extended
MF	GO:2001070	starch binding	IEA	Interproscan

Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Enrichment
MF	GO:0008146	sulfotransferase activity	IEP	Enrichment
MF	GO:0016782	transferase activity, transferring sulphur-containing groups	IEP	Enrichment
MF	GO:0140110	transcription regulator activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002044	CBM_fam20	46	137

External Links

No external refs found!