1. Home
  2. Species
  3. Chlorella vulgaris
  4. Sequence
  5. Transcript_contig_56669

Transcript_contig_56669 (56669)


Aliases : 56669

Description : D-galactoside/L-rhamnose binding SUEL lectin domain; Pectate lyase superfamily protein [Interproscan].


Gene families : OG_01_0001489 (OrthoFinder) Phylogenetic Tree(s): OG0001489_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_56669
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Cz03g02020.t1 No alias Pectate lyase superfamily protein [Interproscan]. 0.01 OrthoFinder
Transcript_contig_57775 57775 Pectate lyase superfamily protein [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000975.1_cds_GFH16287.1_10764 HaLaN_12677, GFH16287 Pectate_lyase_3 domain-containing protein 0.02 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60776.1_4636 PRW60776 Band 7 0.03 OrthoFinder
lcl|LHPG02000016.1_cds_PRW33721.1_3348 PRW33721 Band 7 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
InterPro domains Description Start Stop
IPR024535 Pectate_lyase_SF_prot 277 347
IPR000922 Lectin_gal-bd_dom 104 150
No external refs found!