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  5. Transcript_contig_56607

Transcript_contig_56607 (56607)


Aliases : 56607

Description : Calcineurin-like phosphoesterase domain, ApaH type [Interproscan].


Gene families : OG_01_0000853 (OrthoFinder) Phylogenetic Tree(s): OG0000853_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_56607
Cluster HCCA: Cluster_200

Target Alias Description ECC score Gene Family Method Actions
Sro2307_g322750.1 Contig1768.g15636 Serine threonine-protein phosphatase 0.01 OrthoFinder
Sro3511_g348730.1 Contig1124.g10768 Serine threonine-protein phosphatase 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002098 tRNA wobble uridine modification IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005516 calmodulin binding IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0033588 elongator holoenzyme complex IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR004843 Calcineurin-like_PHP_ApaH 59 151
No external refs found!