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  5. Transcript_contig_56561

Transcript_contig_56561 (56561)


Aliases : 56561

Description : Formin, FH2 domain [Interproscan].


Gene families : OG_01_0000242 (OrthoFinder) Phylogenetic Tree(s): OG0000242_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_56561
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Cre03.g166700 30787105, FOR1 Formin-like protein 12 OS=Oryza sativa subsp. japonica 0.01 OrthoFinder
Cre06.g311250 30779791 No description available 0.02 OrthoFinder
EOD08287 No alias Formin, FH2 domain [Interproscan]. 0.01 OrthoFinder
TP04G00680.1 No alias Formin, FH2 domain [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000025.1_cds_PRW20189.1_5679 PRW20189 Formin 3 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008061 chitin binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0008146 sulfotransferase activity IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
InterPro domains Description Start Stop
IPR015425 FH2_Formin 465 756
No external refs found!