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Transcript_contig_56538 (56538)


Aliases : 56538

Description : Histone deacetylase complex subunit SAP30, Sin3 binding domain [Interproscan].


Gene families : OG_01_0003270 (OrthoFinder) Phylogenetic Tree(s): OG0003270_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_56538
Cluster HCCA: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
lcl|VRMN01000005.1_cds_KAA8493977.1_3841 KAA8493977 Histone deacetylase complex subunit SAP30, Sin3 binding... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEP Enrichment
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR025718 SAP30_Sin3-bd 189 241
No external refs found!