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  5. Transcript_contig_56460

Transcript_contig_56460 (56460)


Aliases : 56460

Description : NUDIX hydrolase domain [Interproscan].


Gene families : OG_01_0007588 (OrthoFinder) Phylogenetic Tree(s): OG0007588_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_56460
Cluster HCCA: Cluster_233

Target Alias Description ECC score Gene Family Method Actions
Cre12.g551800 30793316 No description available 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Enrichment
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP Enrichment
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
BP GO:0006873 cellular ion homeostasis IEP Enrichment
BP GO:0006875 cellular metal ion homeostasis IEP Enrichment
BP GO:0006879 cellular iron ion homeostasis IEP Enrichment
MF GO:0008199 ferric iron binding IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Enrichment
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
BP GO:0019725 cellular homeostasis IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
BP GO:0030003 cellular cation homeostasis IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
BP GO:0046916 cellular transition metal ion homeostasis IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055072 iron ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
BP GO:0055082 cellular chemical homeostasis IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR000086 NUDIX_hydrolase_dom 74 182
No external refs found!