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  5. Transcript_contig_56456

Transcript_contig_56456 (56456)


Aliases : 56456

Description : Hypothetical protein


Gene families : OG_01_0000021 (OrthoFinder) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_56456
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000605.3 tig00000605_g2469.t1 ABC transporter G family member 9 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre12.g547300 30793076 Solute transport.primary active transport.ABC... 0.01 OrthoFinder
Cz03g11100.t1 No alias ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.02 OrthoFinder
Cz09g11220.t1 No alias ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.01 OrthoFinder
Cz11g07110.t1 No alias ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.02 OrthoFinder
Cz12g02110.t1 No alias ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.01 OrthoFinder
OT_10G01520.1 No alias ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.01 OrthoFinder
Vocar.0001s0928.1 32884830 ABC transporter-like; ABC-2 type transporter [Interproscan]. 0.01 OrthoFinder
Vocar.0001s1592.1 32884503 ABC transporter-like; ABC-2 type transporter [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01001486.1_cds_GFH19580.1_14057 HaLaN_16545, GFH19580 Hypothetical protein 0.01 OrthoFinder
lcl|LHPG02000012.1_cds_PRW44993.1_1641 PRW44993 ABC transporter G family member 28 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004100 chitin synthase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0006022 aminoglycan metabolic process IEP Enrichment
BP GO:0006023 aminoglycan biosynthetic process IEP Enrichment
BP GO:0006030 chitin metabolic process IEP Enrichment
BP GO:0006031 chitin biosynthetic process IEP Enrichment
BP GO:0006040 amino sugar metabolic process IEP Enrichment
MF GO:0008061 chitin binding IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
MF GO:0008375 acetylglucosaminyltransferase activity IEP Enrichment
BP GO:0046349 amino sugar biosynthetic process IEP Enrichment
BP GO:1901071 glucosamine-containing compound metabolic process IEP Enrichment
BP GO:1901073 glucosamine-containing compound biosynthetic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!