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  5. Transcript_contig_56425

Transcript_contig_56425 (56425)


Aliases : 56425

Description : DnaJ domain [Interproscan].


Gene families : OG_01_0000003 (OrthoFinder) Phylogenetic Tree(s): OG0000003_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_56425
Cluster HCCA: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000402.9 tig00000402_g186.t1 DnaJ protein ERDJ3A OS=Oryza sativa subsp. japonica 0.02 OrthoFinder
Cre07.g316050 30775379, CDJ2 Chaperone protein dnaJ A6, chloroplastic OS=Arabidopsis thaliana 0.01 OrthoFinder
Cre07.g318900 30775404, DNJ2 No description available 0.01 OrthoFinder
Cz01g13170.t1 No alias DnaJ domain [Interproscan]. 0.02 OrthoFinder
Dusal.0579s00006.1 33194025 DnaJ domain [Interproscan]. 0.02 OrthoFinder
OT_06G02190.1 No alias DnaJ domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold2195.1 2195.1 DnaJ domain [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold2891.3 2891.3 DnaJ domain [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold3020.2 3020.2 DnaJ domain [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold3822.5 3822.5 DnaJ domain [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold64.10 64.10 DnaJ domain [Interproscan]. 0.01 OrthoFinder
Vocar.0033s0152.1 32886391 DnaJ domain [Interproscan]. 0.01 OrthoFinder
XM_003057165.1 MicpuC2_32190, 32190 DnaJ domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01002500.1_cds_GFH24312.1_18789 HaLaN_22082, GFH24312 Molecular chaperone 0.01 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61391.1_130 PRW61391 DnaJ-like protein subfamily B member 4-like isoform B 0.01 OrthoFinder
lcl|LHPG02000004.1_cds_PRW58799.1_7129 PRW58799 Molecular chaperone 0.02 OrthoFinder
lcl|VRMN01000009.1_cds_KAA8492682.1_9375 KAA8492682 Chaperone protein DnaJ 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004057 arginyltransferase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006354 DNA-templated transcription, elongation IEP Enrichment
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006906 vesicle fusion IEP Enrichment
BP GO:0007030 Golgi organization IEP Enrichment
CC GO:0008023 transcription elongation factor complex IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016050 vesicle organization IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
BP GO:0016598 protein arginylation IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016755 aminoacyltransferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0048280 vesicle fusion with Golgi apparatus IEP Enrichment
BP GO:0048284 organelle fusion IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
BP GO:0061025 membrane fusion IEP Enrichment
CC GO:0070449 elongin complex IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090174 organelle membrane fusion IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 41 96
No external refs found!