Transcript_contig_56403 (56403)


Aliases : 56403

Description : Translation elongation factor P/YeiP, central; Elongation factor P, C-terminal; Translation elongation factor, KOW-like [Interproscan].


Gene families : OG_01_0001087 (OrthoFinder) Phylogenetic Tree(s): OG0001087_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_56403
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
PTI_31G00220.1 No alias Translation elongation factor, KOW-like; Elongation... 0.02 OrthoFinder
TP01G10300.1 No alias Translation elongation factor P/YeiP, central;... 0.02 OrthoFinder
lcl|BLLF01002081.1_cds_GFH22613.1_17090 HaLaN_20107, GFH22613 Elongation factor P, C-terminal; Translation elongation... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0006414 translational elongation IEA Interproscan
BP GO:0043043 peptide biosynthetic process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR013185 Transl_elong_KOW-like 38 95
IPR015365 Elong-fact-P_C 162 217
IPR001059 Transl_elong_P/YeiP_cen 103 154
No external refs found!