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  5. Transcript_contig_56380

Transcript_contig_56380 (56380)


Aliases : 56380

Description : DnaJ domain [Interproscan].


Gene families : OG_01_0000003 (OrthoFinder) Phylogenetic Tree(s): OG0000003_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_56380
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020556.42 tig00020556_g11011.t1 External stimuli response.temperature.Hsp... 0.03 OrthoFinder
Cre07.g316050 30775379, CDJ2 Chaperone protein dnaJ A6, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder
Cz02g20030.t1 No alias DnaJ domain [Interproscan]. 0.01 OrthoFinder
OT_01G05750.1 No alias DnaJ domain; Domain of unknown function DUF1977,... 0.04 OrthoFinder
OT_06G02190.1 No alias DnaJ domain [Interproscan]. 0.02 OrthoFinder
OT_12G00410.1 No alias DnaJ domain; Chaperone DnaJ, C-terminal [Interproscan]. 0.01 OrthoFinder
Sro189_g081490.1 No alias Protein DnaJ 0.01 OrthoFinder
Sro865_g212780.1 Contig3005.g23901 Protein DnaJ 0.02 OrthoFinder
Vocar.0003s0122.1 32889189 DnaJ domain [Interproscan]. 0.02 OrthoFinder
Vocar.0016s0077.1 32897888 Chaperone DnaJ, C-terminal; DnaJ domain [Interproscan]. 0.01 OrthoFinder
XM_002505152.1 MICPUN_62456, 62456 DnaJ domain [Interproscan]. 0.03 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8496211.1_2209 KAA8496211 Chaperone protein dnaJ 6 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 9 70
No external refs found!