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  5. Transcript_contig_56355

Transcript_contig_56355 (56355)


Aliases : 56355

Description : CLASP N-terminal domain [Interproscan].


Gene families : OG_01_0002050 (OrthoFinder) Phylogenetic Tree(s): OG0002050_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_56355
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Cz14g16060.t1 No alias CLASP N-terminal domain [Interproscan]. 0.02 OrthoFinder
Cz14g16070.t1 No alias Hypothetical protein 0.02 OrthoFinder
Transcript_contig_82127 82127 Hypothetical protein 0.02 OrthoFinder
lcl|LHPG02000025.1_cds_PRW20290.1_5672 PRW20290 ARM repeat-containing 0.03 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496597.1_326 KAA8496597 CLIP-associated protein 0.02 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8493952.1_3816 KAA8493952 CLIP-associating protein 2 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0007059 chromosome segregation IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008061 chitin binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0051301 cell division IEP Enrichment
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:2001070 starch binding IEP Enrichment
InterPro domains Description Start Stop
IPR024395 CLASP_N_dom 52 247
No external refs found!