Transcript_contig_56323 (56323)

Aliases : 56323

Description : Helicase-associated domain; Domain of unknown function DUF1605 [Interproscan].

Gene families : OG_01_0000129 (OrthoFinder) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Transcript_contig_56323
Cluster	HCCA: Cluster_177

Target	Alias	Description	ECC score	Gene Family Method
Dusal.0260s00001.1	33185455	Helicase, C-terminal; Helicase-associated domain;...	0.03	OrthoFinder
Dusal.1110s00005.1	33202839	Helicase, C-terminal; DEAD/DEAH box helicase domain...	0.03	OrthoFinder
OT_06G02830.1	No alias	Helicase-associated domain; Helicase, C-terminal; Domain...	0.01	OrthoFinder
TP15G01550.1	No alias	Helicase, C-terminal; DEAD/DEAH box helicase domain;...	0.01	OrthoFinder
lcl\|BLLF01003135.1_cds_GFH26457.1_20934	HaLaN_24609, GFH26457	Helicase, C-terminal; Helicase-associated domain [Interproscan].	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	IEA	Interproscan
MF	GO:0008094	ATPase, acting on DNA	None	Extended
MF	GO:0016887	ATPase	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR007502	Helicase-assoc_dom	48	143
IPR011709	DUF1605	228	313

External Links

No external refs found!