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  5. Transcript_contig_56263

Transcript_contig_56263 (56263)


Aliases : 56263

Description : Tetratricopeptide repeat [Interproscan].


Gene families : OG_01_0004387 (OrthoFinder) Phylogenetic Tree(s): OG0004387_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_56263
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
Cre03.g145027 30786947 No description available 0.03 OrthoFinder
Dusal.0062s00018.1 33200770 Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0005337 nucleoside transmembrane transporter activity IEP Enrichment
BP GO:0006066 alcohol metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015858 nucleoside transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0042180 cellular ketone metabolic process IEP Enrichment
BP GO:0042181 ketone biosynthetic process IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0045149 acetoin metabolic process IEP Enrichment
BP GO:0045151 acetoin biosynthetic process IEP Enrichment
BP GO:0046165 alcohol biosynthetic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
MF GO:0047605 acetolactate decarboxylase activity IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:1901264 carbohydrate derivative transport IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
BP GO:1901615 organic hydroxy compound metabolic process IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
BP GO:1901642 nucleoside transmembrane transport IEP Enrichment
BP GO:1902652 secondary alcohol metabolic process IEP Enrichment
BP GO:1902653 secondary alcohol biosynthetic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!