Transcript_contig_56200 (56200)


Aliases : 56200

Description : Hypothetical protein


Gene families : OG_01_0002128 (OrthoFinder) Phylogenetic Tree(s): OG0002128_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_56200
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
Cre16.g694208 30777574 No description available 0.01 OrthoFinder
Cz09g19240.t1 No alias WHIM2 domain [Interproscan]. 0.01 OrthoFinder
Dusal.0492s00001.1 33202395 Hypothetical protein 0.02 OrthoFinder
Transcript_contig_78949 78949 WSTF/Acf1/Cbp146; Zinc finger, PHD-finger; WHIM2 domain... 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Enrichment
CC GO:0017119 Golgi transport complex IEP Enrichment
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Enrichment
CC GO:0031300 intrinsic component of organelle membrane IEP Enrichment
CC GO:0031301 integral component of organelle membrane IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment

No InterPro domains available for this sequence

No external refs found!