Transcript_contig_56150 (56150)


Aliases : 56150

Description : Domain of unknown function DUF4101 [Interproscan].


Gene families : OG_01_0007032 (OrthoFinder) Phylogenetic Tree(s): OG0007032_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_56150
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Cre12.g488500 30793118 Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6,... 0.04 OrthoFinder
Cz09g17290.t1 No alias Hypothetical protein 0.04 OrthoFinder
Vocar.0016s0119.1 32898209 Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
CC GO:0000796 condensin complex IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003682 chromatin binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006323 DNA packaging IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007076 mitotic chromosome condensation IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
BP GO:0030261 chromosome condensation IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
MF GO:2001070 starch binding IEP Enrichment
InterPro domains Description Start Stop
IPR025344 ARC6-like_IMS 782 896
No external refs found!