Transcript_contig_56020 (56020)

Aliases : 56020

Description : Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain; Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal [Interproscan].

Gene families : OG_01_0000552 (OrthoFinder) Phylogenetic Tree(s): OG0000552_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Transcript_contig_56020
Cluster	HCCA: Cluster_44

Target	Alias	Description	ECC score	Gene Family Method
Cre09.g388800	30780566, GDH1	Nutrient uptake.nitrogen assimilation.glutamate...	0.02	OrthoFinder
lcl\|BLLF01002813.1_cds_GFH25435.1_19912	HaLaN_23391, GFH25435	Glutamate dehydrogenase	0.01	OrthoFinder
lcl\|BLLF01003862.1_cds_GFH28404.1_22881	HaLaN_26886, GFH28404	Glutamate dehydrogenase	0.01	OrthoFinder
lcl\|VRMN01000001.1_cds_KAA8497679.1_6632	KAA8497679	Glutamate dehydrogenase	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	cellular amino acid metabolic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016491	oxidoreductase activity	IEA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0055114	obsolete oxidation-reduction process	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	Enrichment
MF	GO:0004751	ribose-5-phosphate isomerase activity	IEP	Enrichment
BP	GO:0006091	generation of precursor metabolites and energy	IEP	Enrichment
MF	GO:0008410	CoA-transferase activity	IEP	Enrichment
BP	GO:0009052	pentose-phosphate shunt, non-oxidative branch	IEP	Enrichment
MF	GO:0016782	transferase activity, transferring sulphur-containing groups	IEP	Enrichment
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	Enrichment
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	IEP	Enrichment
CC	GO:0032993	protein-DNA complex	IEP	Enrichment
CC	GO:0044815	DNA packaging complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR006097	Glu/Leu/Phe/Val_DH_dimer_dom	71	199
IPR006096	Glu/Leu/Phe/Val_DH_C	216	458

External Links

No external refs found!

Transcript_contig_56020 (56020)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation