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  5. Transcript_contig_55995

Transcript_contig_55995 (55995)


Aliases : 55995

Description : Aminoacyl-tRNA synthetase, class II (D/K/N) [Interproscan].


Gene families : OG_01_0001128 (OrthoFinder) Phylogenetic Tree(s): OG0001128_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_55995
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
Cre03.g193800 30787698 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 OrthoFinder
OT_11G02100.1 No alias OB-fold nucleic acid binding domain, AA-tRNA... 0.03 OrthoFinder
XM_002509207.1 MICPUN_63150, 63150 OB-fold nucleic acid binding domain, AA-tRNA... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
InterPro domains Description Start Stop
IPR004364 Aa-tRNA-synt_II 379 645
IPR004364 Aa-tRNA-synt_II 226 288
No external refs found!