Transcript_contig_55909 (55909)


Aliases : 55909

Description : Putative sodium bile acid cotransporter [Interproscan].


Gene families : OG_01_0001769 (OrthoFinder) Phylogenetic Tree(s): OG0001769_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_55909
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Cre02.g147450 30785682 Solute transport.carrier-mediated transport.BART... 0.02 OrthoFinder
Cre09.g393250 30780809 Solute transport.carrier-mediated transport.BART... 0.03 OrthoFinder
Cre12.g521950 30793629 Solute transport.carrier-mediated transport.BART... 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Enrichment
BP GO:0006066 alcohol metabolic process IEP Enrichment
MF GO:0008430 selenium binding IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
BP GO:0019751 polyol metabolic process IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
BP GO:0043647 inositol phosphate metabolic process IEP Enrichment
BP GO:0044282 small molecule catabolic process IEP Enrichment
BP GO:0046164 alcohol catabolic process IEP Enrichment
BP GO:0046174 polyol catabolic process IEP Enrichment
BP GO:0046434 organophosphate catabolic process IEP Enrichment
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Enrichment
BP GO:0046855 inositol phosphate dephosphorylation IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0071545 inositol phosphate catabolic process IEP Enrichment
BP GO:1901615 organic hydroxy compound metabolic process IEP Enrichment
BP GO:1901616 organic hydroxy compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR016833 Put_Na-Bile_cotransptr 19 339
No external refs found!