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  5. Transcript_contig_55894

Transcript_contig_55894 (55894)


Aliases : 55894

Description : Serine-threonine/tyrosine-protein kinase, catalytic domain [Interproscan].


Gene families : OG_01_0000008 (OrthoFinder) Phylogenetic Tree(s): OG0000008_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_55894
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000025.6 tig00000025_g7913.t1 Serine/threonine-protein kinase STY8 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cpa|evm.model.tig00000042.230 tig00000042_g15629.t1 Serine/threonine-protein kinase STY13 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cpa|evm.model.tig00000057.40 tig00000057_g58.t1 Enzyme classification.EC_2 transferases.EC_2.7... 0.01 OrthoFinder
Cpa|evm.model.tig00000158.62 tig00000158_g10167.t1 Protein modification.phosphorylation.TKL kinase... 0.01 OrthoFinder
Cpa|evm.model.tig00000198.2 tig00000198_g16066.t1 Serine/threonine-protein kinase STY13 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cpa|evm.model.tig00000319.20 tig00000319_g24132.t1 RNA processing.RNA splicing.U2-type-intron-specific... 0.02 OrthoFinder
Cpa|evm.model.tig00000459.16 tig00000459_g1078.t1 Protein modification.phosphorylation.TKL kinase... 0.01 OrthoFinder
Cpa|evm.model.tig00000523.22 tig00000523_g1841.t1 Probable serine/threonine-protein kinase SIS8... 0.02 OrthoFinder
Cpa|evm.model.tig00000808.17 tig00000808_g4403.t1 Serine/threonine-protein kinase STY8 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cpa|evm.model.tig00000981.24 tig00000981_g5878.t1 Protein modification.phosphorylation.TKL kinase... 0.01 OrthoFinder
Cpa|evm.model.tig00020603.49 tig00020603_g11780.t1 Probable serine/threonine-protein kinase At1g01540... 0.01 OrthoFinder
Cpa|evm.model.tig00020704.33 tig00020704_g13174.t1 Protein modification.phosphorylation.TKL kinase... 0.01 OrthoFinder
Cpa|evm.model.tig00020938.19 tig00020938_g16143.t1 Protein modification.phosphorylation.TKL kinase... 0.01 OrthoFinder
Cpa|evm.model.tig00021373.8 tig00021373_g21076.t1 Protein modification.phosphorylation.TKL kinase... 0.02 OrthoFinder
Cpa|evm.model.tig00021616.14 tig00021616_g22919.t1 Serine/threonine-protein kinase STY46 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cre03.g194100 30787204, MAPKKK3 Protein modification.phosphorylation.TKL kinase... 0.01 OrthoFinder
Cre05.g236216 30783192 Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre09.g405900 30780312 Protein modification.phosphorylation.TKL kinase... 0.01 OrthoFinder
Cre16.g659400 30777813 Protein modification.phosphorylation.TKL kinase... 0.02 OrthoFinder
Cz01g28220.t1 No alias Ankyrin repeat-containing domain; Protein kinase domain... 0.05 OrthoFinder
Cz03g23150.t1 No alias Serine-threonine/tyrosine-protein kinase, catalytic... 0.03 OrthoFinder
Cz14g25010.t1 No alias Serine-threonine/tyrosine-protein kinase, catalytic... 0.04 OrthoFinder
Dusal.0459s00011.1 33201725 Serine-threonine/tyrosine-protein kinase, catalytic... 0.02 OrthoFinder
Dusal.0571s00001.1 33195260 Hypothetical protein 0.01 OrthoFinder
OT_05G02490.1 No alias Serine-threonine/tyrosine-protein kinase, catalytic... 0.03 OrthoFinder
OT_09G00790.1 No alias Serine-threonine/tyrosine-protein kinase, catalytic... 0.03 OrthoFinder
OT_11G00900.1 No alias Serine-threonine/tyrosine-protein kinase, catalytic... 0.01 OrthoFinder
OT_15G03040.1 No alias Ankyrin repeat-containing domain; Protein kinase domain... 0.02 OrthoFinder
UNPLg00276.t1 No alias Serine-threonine/tyrosine-protein kinase, catalytic... 0.02 OrthoFinder
Vocar.0001s0157.1 32884941 Serine-threonine/tyrosine-protein kinase, catalytic... 0.03 OrthoFinder
Vocar.0008s0103.1 32896980 Serine-threonine/tyrosine-protein kinase, catalytic... 0.01 OrthoFinder
Vocar.0018s0005.1 32898641 Serine-threonine/tyrosine-protein kinase, catalytic... 0.01 OrthoFinder
Vocar.0034s0092.1 32893116 Serine-threonine/tyrosine-protein kinase, catalytic... 0.01 OrthoFinder
Vocar.0035s0068.1 32896812 Ethylene-responsive protein kinase Le-CTR1;... 0.02 OrthoFinder
XM_002501256.1 MICPUN_108063, 108063 Serine-threonine/tyrosine-protein kinase, catalytic... 0.01 OrthoFinder
XM_002504077.1 MICPUN_73365, 73365 Serine-threonine/tyrosine-protein kinase, catalytic... 0.02 OrthoFinder
XM_002509234.1 MICPUN_87088, 87088 Serine-threonine/tyrosine-protein kinase, catalytic... 0.04 OrthoFinder
lcl|BLLF01001417.1_cds_GFH19168.1_13645 HaLaN_16072, GFH19168 Protein kinase domain-containing protein 0.01 OrthoFinder
lcl|BLLF01002127.1_cds_GFH22806.1_17283 HaLaN_20322, GFH22806 Mitogen activated protein kinase kinase kinase 3 0.03 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61238.1_733 PRW61238 Serine threonine-kinase CTR1 0.02 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58265.1_7820 PRW58265 Serine threonine-kinase CTR1 0.02 OrthoFinder
lcl|LHPG02000015.1_cds_PRW33836.1_2978 PRW33836 Serine threonine-kinase CTR1 0.05 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499808.1_8761 KAA8499808 Serine/threonine-protein kinase STY46 0.01 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8492913.1_2649 KAA8492913 Serine/threonine-protein kinase EDR1 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA Interproscan
BP GO:0006468 protein phosphorylation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR001245 Ser-Thr/Tyr_kinase_cat_dom 337 580
No external refs found!