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  5. Cpa|evm.model.tig00000718.1

Cpa|evm.model.tig00000718.1 (tig00000718_g3679.t1)


Aliases : tig00000718_g3679.t1

Description : ABC transporter C family member 2 OS=Arabidopsis thaliana


Gene families : OG_01_0000039 (OrthoFinder) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000718.1
Cluster HCCA: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
Cre02.g103250 30785465, MRP5 Solute transport.primary active transport.ABC... 0.03 OrthoFinder
Cre04.g228650 30791460 Solute transport.primary active transport.ABC... 0.02 OrthoFinder
Cre07.g325761 30775279 ABC transporter C family member 2 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre13.g564900 30784450, MRP3 Solute transport.primary active transport.ABC... 0.06 OrthoFinder
Cre17.g734612 30781956, MRP2 ABC transporter C family member 14 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cz03g28180.t1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
Cz05g17060.t1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.06 OrthoFinder
Dusal.0852s00003.1 33185426 ABC transporter-like; ABC transporter type 1,... 0.02 OrthoFinder
EOD08599 No alias ABC transporter type 1, transmembrane domain; ABC... 0.03 OrthoFinder
EOD12092 No alias ABC transporter type 1, transmembrane domain; ABC... 0.01 OrthoFinder
EOD26066 No alias EF-hand domain; ABC transporter type 1, transmembrane... 0.02 OrthoFinder
EOD33714 No alias ABC transporter type 1, transmembrane domain; ABC... 0.04 OrthoFinder
PTI_03G06590.1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.01 OrthoFinder
PTI_10G02780.1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
Sro1322_g262550.1 Contig3764.g28905 Multiple drug resistance-associated protein-like transporter 1 0.04 OrthoFinder
Sro183_g079600.1 Contig3056.g24305 Multiple drug resistance-associated protein-like transporter 1 0.02 OrthoFinder
Sro200_g084620.1 Contig201.g2353 Oligomycin resistance ATP-dependent permease YOR1 0.01 OrthoFinder
Sro2938_g340630.1 Contig1091.g10559 Oligomycin resistance ATP-dependent permease YOR1 0.03 OrthoFinder
Sro61_g035030.1 Contig3112.g24756 Multiple drug resistance-associated protein-like transporter 1 0.01 OrthoFinder
TP04G07990.1 No alias ABC transporter-like; ABC transporter type 1,... 0.03 OrthoFinder
TP07G05800.1 No alias ABC transporter-like; ABC transporter type 1,... 0.01 OrthoFinder
Transcript_contig_55599 55599 ABC transporter type 1, transmembrane domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_56405 56405 ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
Vocar.0028s0030.1 32895600 ABC transporter-like; ABC transporter type 1,... 0.01 OrthoFinder
XM_002508173.1 MICPUN_94915, 94915 ATP-binding cassette superfamily 0.03 OrthoFinder
lcl|BLLF01002022.1_cds_GFH22355.1_16832 HaLaN_19808, GFH22355 ABC transporter type 1, transmembrane domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01003175.1_cds_GFH26596.1_21073 HaLaN_24770, GFH26596 ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56046.1_9960 PRW56046 Multidrug resistance-associated 1 isoform X1 0.04 OrthoFinder
lcl|LHPG02000015.1_cds_PRW33949.1_2946 PRW33949 ABC transporter isoform A 0.03 OrthoFinder
lcl|VRMN01000012.1_cds_KAA8491694.1_5162 KAA8491694 Multidrug resistance-associated protein 1 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004788 thiamine diphosphokinase activity IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006869 lipid transport IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
BP GO:0007009 plasma membrane organization IEP Enrichment
BP GO:0015748 organophosphate ester transport IEP Enrichment
BP GO:0015914 phospholipid transport IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016778 diphosphotransferase activity IEP Enrichment
BP GO:0017004 cytochrome complex assembly IEP Enrichment
BP GO:0017121 plasma membrane phospholipid scrambling IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
BP GO:0034204 lipid translocation IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0045332 phospholipid translocation IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0051179 localization IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0097035 regulation of membrane lipid distribution IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 419 536
IPR011527 ABC1_TM_dom 61 325
No external refs found!