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  5. Transcript_contig_55778

Transcript_contig_55778 (55778)


Aliases : 55778

Description : Synaptotagmin, SMP domain; C2 domain [Interproscan].


Gene families : OG_01_0011223 (OrthoFinder) Phylogenetic Tree(s): OG0011223_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_55778
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
lcl|LHPG02000011.1_cds_PRW45479.1_1431 PRW45479 Synaptotagmin-5-like 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR039010 Synaptotagmin_SMP 94 295
IPR000008 C2_dom 312 415
No external refs found!