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  5. Transcript_contig_55772

Transcript_contig_55772 (55772)


Aliases : 55772

Description : HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase [Interproscan].


Gene families : OG_01_0000966 (OrthoFinder) Phylogenetic Tree(s): OG0000966_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_55772
Cluster HCCA: Cluster_227

Target Alias Description ECC score Gene Family Method Actions
Cz08g29050.t1 No alias Hypothetical protein 0.02 OrthoFinder
lcl|BLLF01000023.1_cds_GFH06129.1_606 HaLaN_00708, GFH06129 HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase... 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
InterPro domains Description Start Stop
IPR008380 HAD-SF_hydro_IG_5-nucl 117 485
No external refs found!