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  5. Transcript_contig_55755

Transcript_contig_55755 (55755)


Aliases : 55755

Description : Biotin carboxylase, C-terminal; Propionyl-coenzyme A carboxylase, BT domain; Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain; Biotin/lipoyl attachment; Biotin carboxylase-like, N-terminal domain [Interproscan].


Gene families : OG_01_0000176 (OrthoFinder) Phylogenetic Tree(s): OG0000176_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_55755
Cluster HCCA: Cluster_251

Target Alias Description ECC score Gene Family Method Actions
Cre06.g278098 30778609, MCC1 Amino acid metabolism.degradation.branched-chain amino... 0.02 OrthoFinder
Cz15g20050.t1 No alias Carbamoyl-phosphate synthetase large subunit-like,... 0.01 OrthoFinder
PTI_23G01920.1 No alias Biotin/lipoyl attachment; Biotin carboxylase-like,... 0.02 OrthoFinder
PTI_26G00480.1 No alias Biotin/lipoyl attachment; Biotin carboxylase-like,... 0.02 OrthoFinder
Sro379_g130470.1 Contig3398.g26564 Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial 0.01 OrthoFinder
Sro434_g142010.1 Contig783.g8758 Propionyl-CoA carboxylase, biotin carboxylase and... 0.02 OrthoFinder
lcl|BLLF01002395.1_cds_GFH23912.1_18389 HaLaN_21606, GFH23912 Carbamoyl-phosphate synthetase large subunit-like,... 0.02 OrthoFinder
lcl|LHPG02000026.1_cds_PRW18307.1_5882 PRW18307 Propionyl-carboxylase alpha mitochondrial 0.04 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497406.1_1135 KAA8497406 Propionyl-CoA carboxylase alpha chain, mitochondrial 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
MF GO:0031419 cobalamin binding IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055070 copper ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment
InterPro domains Description Start Stop
IPR005482 Biotin_COase_C 375 481
IPR005481 BC-like_N 40 145
IPR000089 Biotin_lipoyl 659 724
IPR005479 CbamoylP_synth_lsu-like_ATP-bd 153 360
IPR041265 PCC_BT 505 650
No external refs found!