Transcript_contig_55742 (55742)


Aliases : 55742

Description : Rubrerythrin [Interproscan].


Gene families : OG_01_0003053 (OrthoFinder) Phylogenetic Tree(s): OG0003053_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_55742
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
Cre12.g510050 30792531, CTH1 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.03 OrthoFinder
Cz16g08310.t1 No alias Rubrerythrin [Interproscan]. 0.02 OrthoFinder
OT_15G02850.1 No alias Rubrerythrin [Interproscan]. 0.01 OrthoFinder
Vocar.0016s0214.1 32897872 Rubrerythrin [Interproscan]. 0.01 OrthoFinder
XM_002504605.1 MICPUN_107081, 107081 Rubrerythrin [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000012.1_cds_PRW45136.1_2046 PRW45136 Copper target 1 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004819 glutamine-tRNA ligase activity IEP Enrichment
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006425 glutaminyl-tRNA aminoacylation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
MF GO:0008184 glycogen phosphorylase activity IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR003251 Rubrerythrin 124 256
No external refs found!