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Aliases : 55654
Description : SANT/Myb domain; Myb-like DNA-binding domain [Interproscan].
Gene families : OG_01_0000018 (OrthoFinder) Phylogenetic Tree(s): OG0000018_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Transcript_contig_55654 | |
| Cluster | HCCA: Cluster_146 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000663.2 | tig00000663_g2933.t1 | RNA biosynthesis.transcriptional activation.MYB... | 0.01 | OrthoFinder | |
| Cpa|evm.model.tig00020780.48 | tig00020780_g13797.t2 | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder | |
| Cre03.g144747 | 30787894 | RNA biosynthesis.transcriptional activation.MYB... | 0.01 | OrthoFinder | |
| Cre12.g522400 | 30793439 | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder | |
| Cz11g12210.t1 | No alias | SANT/Myb domain [Interproscan]. | 0.02 | OrthoFinder | |
| Cz13g11180.t1 | No alias | SANT/Myb domain [Interproscan]. | 0.01 | OrthoFinder | |
| Cz15g15180.t1 | No alias | SANT/Myb domain [Interproscan]. | 0.01 | OrthoFinder | |
| Cz17g16070.t1 | No alias | SANT/Myb domain [Interproscan]. | 0.01 | OrthoFinder | |
| Dusal.0270s00001.1 | 33190010 | SANT/Myb domain [Interproscan]. | 0.02 | OrthoFinder | |
| EOD39718 | No alias | Myb-like DNA-binding domain [Interproscan]. | 0.01 | OrthoFinder | |
| OT_05G01310.1 | No alias | SANT/Myb domain [Interproscan]. | 0.01 | OrthoFinder | |
| OT_09G00440.1 | No alias | SANT/Myb domain [Interproscan]. | 0.02 | OrthoFinder | |
| PTI_10G00850.1 | No alias | SANT/Myb domain; Myb-like DNA-binding domain [Interproscan]. | 0.02 | OrthoFinder | |
| PTI_17G00510.1 | No alias | SANT/Myb domain [Interproscan]. | 0.02 | OrthoFinder | |
| PTI_29G00320.1 | No alias | SANT/Myb domain; Myb-like DNA-binding domain [Interproscan]. | 0.02 | OrthoFinder | |
| Transcript_contig_57499 | 57499 | SANT/Myb domain [Interproscan]. | 0.01 | OrthoFinder | |
| Vocar.0023s0018.1 | 32883402 | SANT/Myb domain [Interproscan]. | 0.01 | OrthoFinder | |
| lcl|BLLF01000566.1_cds_GFH13015.1_7492 | HaLaN_08814, GFH13015 | SANT/Myb domain [Interproscan]. | 0.02 | OrthoFinder | |
| lcl|LHPG02000012.1_cds_PRW45035.1_1994 | PRW45035 | Homeodomain | 0.02 | OrthoFinder | |
| lcl|VRMN01000001.1_cds_KAA8497935.1_6888 | KAA8497935 | Transcription factor MYB3R-5 | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| MF | GO:0003677 | DNA binding | IEP | Enrichment |
| MF | GO:0004100 | chitin synthase activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005509 | calcium ion binding | IEP | Enrichment |
| MF | GO:0005524 | ATP binding | IEP | Enrichment |
| BP | GO:0006022 | aminoglycan metabolic process | IEP | Enrichment |
| BP | GO:0006023 | aminoglycan biosynthetic process | IEP | Enrichment |
| BP | GO:0006030 | chitin metabolic process | IEP | Enrichment |
| BP | GO:0006031 | chitin biosynthetic process | IEP | Enrichment |
| BP | GO:0006040 | amino sugar metabolic process | IEP | Enrichment |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006259 | DNA metabolic process | IEP | Enrichment |
| BP | GO:0006270 | DNA replication initiation | IEP | Enrichment |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0008152 | metabolic process | IEP | Enrichment |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | Enrichment |
| MF | GO:0008375 | acetylglucosaminyltransferase activity | IEP | Enrichment |
| MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
| MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0046349 | amino sugar biosynthetic process | IEP | Enrichment |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
| BP | GO:0071704 | organic substance metabolic process | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
| BP | GO:1901071 | glucosamine-containing compound metabolic process | IEP | Enrichment |
| BP | GO:1901073 | glucosamine-containing compound biosynthetic process | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001005 | SANT/Myb | 11 | 52 |
| No external refs found! |