Transcript_contig_55576 (55576)


Aliases : 55576

Description : Tetratricopeptide repeat 2 [Interproscan].


Gene families : OG_01_0000105 (OrthoFinder) Phylogenetic Tree(s): OG0000105_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_55576
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
Cz04g10220.t1 No alias Tetratricopeptide repeat 2; Tetratricopeptide repeat... 0.02 OrthoFinder
XM_002500337.1 MICPUN_56687, 56687 STI1 domain; Tetratricopeptide repeat 1;... 0.02 OrthoFinder
XM_003056748.1 MicpuC2_56220, 56220 Tetratricopeptide repeat [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01001096.1_cds_GFH17098.1_11575 HaLaN_13654, GFH17098 Tetratricopeptide repeat 1; Tetratricopeptide repeat 2... 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004181 metallocarboxypeptidase activity IEP Enrichment
BP GO:0006302 double-strand break repair IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
MF GO:0008235 metalloexopeptidase activity IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
BP GO:0030328 prenylcysteine catabolic process IEP Enrichment
BP GO:0030329 prenylcysteine metabolic process IEP Enrichment
MF GO:0031419 cobalamin binding IEP Enrichment
BP GO:0042219 cellular modified amino acid catabolic process IEP Enrichment
MF GO:0042802 identical protein binding IEP Enrichment
MF GO:0042803 protein homodimerization activity IEP Enrichment
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
CC GO:0098533 ATPase dependent transmembrane transport complex IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1904949 ATPase complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR013105 TPR_2 228 260
No external refs found!