Transcript_contig_55565 (55565)

Aliases : 55565

Description : RNA recognition motif domain [Interproscan].

Gene families : OG_01_0001774 (OrthoFinder) Phylogenetic Tree(s): OG0001774_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Transcript_contig_55565
Cluster	HCCA: Cluster_163

Target	Alias	Description	ECC score	Gene Family Method	Actions
Vocar.0015s0375.1	32899057	RNA recognition motif domain [Interproscan].	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006644	phospholipid metabolic process	IEP	Enrichment
BP	GO:0008610	lipid biosynthetic process	IEP	Enrichment
BP	GO:0008654	phospholipid biosynthetic process	IEP	Enrichment
MF	GO:0008942	nitrite reductase [NAD(P)H] activity	IEP	Enrichment
MF	GO:0016661	oxidoreductase activity, acting on other nitrogenous compounds as donors	IEP	Enrichment
MF	GO:0016780	phosphotransferase activity, for other substituted phosphate groups	IEP	Enrichment
BP	GO:0044255	cellular lipid metabolic process	IEP	Enrichment
MF	GO:0046857	oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor	IEP	Enrichment
MF	GO:0098809	nitrite reductase activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	445	508
IPR000504	RRM_dom	122	183
IPR000504	RRM_dom	25	86

External Links

No external refs found!