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Transcript_contig_55523 (55523)


Aliases : 55523

Description : Short-chain dehydrogenase/reductase SDR; Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase, N-terminal [Interproscan].


Gene families : OG_01_0000876 (OrthoFinder) Phylogenetic Tree(s): OG0000876_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_55523
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
Cz06g29140.t1 No alias Oxidoreductase, N-terminal domain; Alcohol... 0.02 OrthoFinder
Dusal.0028s00042.1 33198471 Alcohol dehydrogenase, C-terminal; Oxidoreductase,... 0.02 OrthoFinder
Dusal.0665s00003.1 33203210 Alcohol dehydrogenase, C-terminal; Oxidoreductase,... 0.01 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
MF GO:2001070 starch binding IEP Enrichment
InterPro domains Description Start Stop
IPR013149 ADH_C 472 603
IPR002347 SDR_fam 4 217
IPR013154 ADH_N 347 411
No external refs found!