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  5. Transcript_contig_55476

Transcript_contig_55476 (55476)


Aliases : 55476

Description : EF-hand domain pair [Interproscan].


Gene families : OG_01_0002999 (OrthoFinder) Phylogenetic Tree(s): OG0002999_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_55476
Cluster HCCA: Cluster_249

Target Alias Description ECC score Gene Family Method Actions
XM_003061451.1 MicpuC2_41664, 41664 Hypothetical protein 0.01 OrthoFinder
lcl|LHPG02000012.1_cds_PRW44943.1_2029 PRW44943 Coiled-coil domain-containing 40 isoform B 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Enrichment
CC GO:0000445 THO complex part of transcription export complex IEP Enrichment
MF GO:0001671 ATPase activator activity IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment

No InterPro domains available for this sequence

No external refs found!