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  5. Transcript_contig_55456

Transcript_contig_55456 (55456)


Aliases : 55456

Description : Zinc finger, RING-type [Interproscan].


Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_55456
Cluster HCCA: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
Cz09g32110.t1 No alias Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
Sro492_g153770.1 Contig2481.g20303 Protein ligase ZNRF3 0.03 OrthoFinder
TP07G01800.1 No alias Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
XM_003063326.1 MicpuC2_48778, 48778 Hypothetical protein 0.01 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496531.1_260 KAA8496531 E3 ubiquitin-protein ligase RLIM 0.01 OrthoFinder
lcl|VRMN01000018.1_cds_KAA8490863.1_5635 KAA8490863 E3 ubiquitin-protein ligase SDIR1 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 156 197
No external refs found!