Transcript_contig_55420 (55420)

Aliases : 55420

Description : Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain; Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal [Interproscan].

Gene families : OG_01_0000552 (OrthoFinder) Phylogenetic Tree(s): OG0000552_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Transcript_contig_55420
Cluster	HCCA: Cluster_43

Target	Alias	Description	ECC score	Gene Family Method
Cre05.g232150	30783135, GDH2	Nutrient uptake.nitrogen assimilation.glutamate...	0.01	OrthoFinder
Cz06g01130.t1	No alias	Glutamate/phenylalanine/leucine/valine dehydrogenase,...	0.01	OrthoFinder
Cz14g05250.t1	No alias	Glutamate/phenylalanine/leucine/valine dehydrogenase,...	0.02	OrthoFinder
Dusal.0323s00002.1	33192407	Glutamate/phenylalanine/leucine/valine dehydrogenase,...	0.01	OrthoFinder
SymbC1.scaffold1.1320	1.1320	Haemerythrin-like; Cytochrome c oxidase subunit I;...	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	cellular amino acid metabolic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016491	oxidoreductase activity	IEA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0055114	obsolete oxidation-reduction process	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003735	structural constituent of ribosome	IEP	Enrichment
MF	GO:0005524	ATP binding	IEP	Enrichment
CC	GO:0005840	ribosome	IEP	Enrichment
BP	GO:0006412	translation	IEP	Enrichment
BP	GO:0006518	peptide metabolic process	IEP	Enrichment
MF	GO:0017076	purine nucleotide binding	IEP	Enrichment
MF	GO:0030554	adenyl nucleotide binding	IEP	Enrichment
MF	GO:0032553	ribonucleotide binding	IEP	Enrichment
MF	GO:0032555	purine ribonucleotide binding	IEP	Enrichment
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Enrichment
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Enrichment
BP	GO:0043043	peptide biosynthetic process	IEP	Enrichment
BP	GO:0043603	cellular amide metabolic process	IEP	Enrichment
BP	GO:0043604	amide biosynthetic process	IEP	Enrichment
MF	GO:0097367	carbohydrate derivative binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR006097	Glu/Leu/Phe/Val_DH_dimer_dom	78	205
IPR006096	Glu/Leu/Phe/Val_DH_C	224	456

External Links

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Transcript_contig_55420 (55420)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation