Transcript_contig_55416 (55416)


Aliases : 55416

Description : SprT-like [Interproscan].


Gene families : OG_01_0003249 (OrthoFinder) Phylogenetic Tree(s): OG0003249_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_55416
Cluster HCCA: Cluster_212


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
BP GO:0006835 dicarboxylic acid transport IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
BP GO:0015711 organic anion transport IEP Enrichment
BP GO:0015740 C4-dicarboxylate transport IEP Enrichment
BP GO:0015743 malate transport IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0046942 carboxylic acid transport IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
BP GO:0071586 CAAX-box protein processing IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR006640 SprT-like_domain 214 328
No external refs found!