1. Home
  2. Species
  3. Chlorella vulgaris
  4. Sequence
  5. Transcript_contig_55357

Transcript_contig_55357 (55357)


Aliases : 55357

Description : C4-type zinc-finger of DNA polymerase delta; DNA-directed DNA polymerase, family B, multifunctional domain [Interproscan].


Gene families : OG_01_0001531 (OrthoFinder) Phylogenetic Tree(s): OG0001531_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_55357
Cluster HCCA: Cluster_218

Target Alias Description ECC score Gene Family Method Actions
Cz03g38160.t1 No alias C4-type zinc-finger of DNA polymerase delta;... 0.01 OrthoFinder
Cz03g38170.t1 No alias DNA-directed DNA polymerase, family B, multifunctional... 0.02 OrthoFinder
PTI_12G00450.1 No alias DNA-directed DNA polymerase, family B, multifunctional... 0.01 OrthoFinder
Sro278_g106640.1 Contig1952.g16779 Polymerase delta catalytic subunit 0.01 OrthoFinder
Vocar.0007s0405.1 32888249 C4-type zinc-finger of DNA polymerase delta;... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030126 COPI vesicle coat IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
InterPro domains Description Start Stop
IPR025687 Znf-C4pol 337 408
IPR006134 DNA-dir_DNA_pol_B_multi_dom 2 299
No external refs found!