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  5. Cpa|evm.model.tig00000711.27

Cpa|evm.model.tig00000711.27 (tig00000711_g3387.t1)


Aliases : tig00000711_g3387.t1

Description : Isovaleryl-CoA dehydrogenase, mitochondrial OS=Oryza sativa subsp. japonica


Gene families : OG_01_0000190 (OrthoFinder) Phylogenetic Tree(s): OG0000190_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000711.27
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Cre06.g296400 30778744 Amino acid metabolism.degradation.branched-chain amino... 0.03 OrthoFinder
Cz06g00040.t1 No alias Acyl-CoA dehydrogenase/oxidase, N-terminal; Acyl-CoA... 0.02 OrthoFinder
PTI_03G00760.1 No alias Acyl-CoA dehydrogenase/oxidase, N-terminal; Acyl-CoA... 0.01 OrthoFinder
Sro762_g198700.1 Contig3620.g28011 Isovaleryl-CoA dehydrogenase, mitochondrial 0.02 OrthoFinder
SymbC1.scaffold4.1618 4.1618 PEP-CTERM protein-sorting domain; Glyoxalase/fosfomycin... 0.01 OrthoFinder
SymbC1.scaffold409.5 409.5 Acyl-CoA dehydrogenase/oxidase, N-terminal; Acyl-CoA... 0.01 OrthoFinder
TP10G02230.1 No alias Acyl-CoA dehydrogenase/oxidase C-terminal; Acyl-CoA... 0.01 OrthoFinder
Transcript_contig_58396 58396 Acyl-CoA dehydrogenase/oxidase, N-terminal; Acyl-CoA... 0.01 OrthoFinder
Vocar.0012s0263.1 32894907 Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA... 0.01 OrthoFinder
Vocar.0029s0163.1 32887516 Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA... 0.02 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495778.1_1776 KAA8495778 Isovaleryl-CoA dehydrogenase, mitochondrial 0.02 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495843.1_1841 KAA8495843 Putative short/branched chain specific acyl-CoA dehydrogenase 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Enrichment
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP Enrichment
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Enrichment
MF GO:0003997 acyl-CoA oxidase activity IEP Enrichment
MF GO:0004150 dihydroneopterin aldolase activity IEP Enrichment
MF GO:0004399 histidinol dehydrogenase activity IEP Enrichment
MF GO:0004411 homogentisate 1,2-dioxygenase activity IEP Enrichment
MF GO:0004470 malic enzyme activity IEP Enrichment
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Enrichment
CC GO:0005777 peroxisome IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006401 RNA catabolic process IEP Enrichment
BP GO:0006402 mRNA catabolic process IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
BP GO:0006558 L-phenylalanine metabolic process IEP Enrichment
BP GO:0006559 L-phenylalanine catabolic process IEP Enrichment
BP GO:0006570 tyrosine metabolic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008252 nucleotidase activity IEP Enrichment
MF GO:0008253 5'-nucleotidase activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009063 cellular amino acid catabolic process IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009074 aromatic amino acid family catabolic process IEP Enrichment
BP GO:0009892 negative regulation of metabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Enrichment
BP GO:0010629 negative regulation of gene expression IEP Enrichment
BP GO:0016054 organic acid catabolic process IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016615 malate dehydrogenase activity IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
BP GO:0019439 aromatic compound catabolic process IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
BP GO:0034655 nucleobase-containing compound catabolic process IEP Enrichment
CC GO:0042579 microbody IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044270 cellular nitrogen compound catabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0044282 small molecule catabolic process IEP Enrichment
BP GO:0046395 carboxylic acid catabolic process IEP Enrichment
BP GO:0046700 heterocycle catabolic process IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0110154 RNA decapping IEP Enrichment
BP GO:0110156 methylguanosine-cap decapping IEP Enrichment
BP GO:1901361 organic cyclic compound catabolic process IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
BP GO:1901606 alpha-amino acid catabolic process IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Enrichment
BP GO:1902222 erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR013786 AcylCoA_DH/ox_N 72 128
IPR009075 AcylCo_DH/oxidase_C 289 432
No external refs found!