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  5. Transcript_contig_55205

Transcript_contig_55205 (55205)


Aliases : 55205

Description : Zinc-finger domain of monoamine-oxidase A repressor R1 [Interproscan].


Gene families : OG_01_0001080 (OrthoFinder) Phylogenetic Tree(s): OG0001080_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_55205
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021582.33 tig00021582_g22631.t1 No description available 0.05 OrthoFinder
Cre12.g531350 30792637, CGL62 No description available 0.04 OrthoFinder
OT_10G02420.1 No alias Zinc-finger domain of monoamine-oxidase A repressor R1... 0.03 OrthoFinder
OT_13G02800.1 No alias Zinc-finger domain of monoamine-oxidase A repressor R1... 0.02 OrthoFinder
XM_002504659.1 MICPUN_61536, 61536 Zinc-finger domain of monoamine-oxidase A repressor R1... 0.01 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61384.1_141 PRW61384 Cell division cycle-associated 7 0.05 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58633.1_7594 PRW58633 Cell division cycle-associated 7 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
CC GO:0000808 origin recognition complex IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003682 chromatin binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005664 nuclear origin of replication recognition complex IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
MF GO:2001070 starch binding IEP Enrichment
InterPro domains Description Start Stop
IPR018866 Znf-4CXXC_R1 136 232
No external refs found!