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  5. Transcript_contig_55126

Transcript_contig_55126 (55126)


Aliases : 55126

Description : Heat shock protein Hsp90 family; Histidine kinase/HSP90-like ATPase [Interproscan].


Gene families : OG_01_0000204 (OrthoFinder) Phylogenetic Tree(s): OG0000204_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_55126
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000989.4 tig00000989_g6080.t1 External stimuli response.temperature.Hsp... 0.02 OrthoFinder
Cpa|evm.model.tig00021126.11 tig00021126_g18461.t1 External stimuli response.temperature.Hsp... 0.06 OrthoFinder
Cre02.g080650 30784948, HSP90B External stimuli response.temperature.Hsp... 0.05 OrthoFinder
Cre12.g514850 30793174, HSP90C External stimuli response.temperature.Hsp... 0.03 OrthoFinder
Cz02g06070.t1 No alias Heat shock protein Hsp90 family; Histidine... 0.02 OrthoFinder
Cz09g17250.t1 No alias Heat shock protein Hsp90 family; Histidine... 0.01 OrthoFinder
Dusal.0035s00018.1 33196672 Heat shock protein Hsp90 family; Histidine... 0.01 OrthoFinder
Dusal.0402s00003.1 33196863 Heat shock protein Hsp90 family; Histidine... 0.02 OrthoFinder
Dusal.0433s00005.1 33191376 Heat shock protein Hsp90 family; Histidine... 0.02 OrthoFinder
EOD24832 No alias Histidine kinase/HSP90-like ATPase; Heat shock protein... 0.02 OrthoFinder
EOD30127 No alias Heat shock protein Hsp90 family [Interproscan]. 0.01 OrthoFinder
EOD36636 No alias Histidine kinase/HSP90-like ATPase; Heat shock protein... 0.02 OrthoFinder
OT_10G01260.1 No alias Heat shock protein Hsp90 family; Histidine... 0.02 OrthoFinder
PTI_28G01220.1 No alias Heat shock protein Hsp90 family; Histidine... 0.02 OrthoFinder
PTI_31G00330.1 No alias Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase;... 0.02 OrthoFinder
Sro1899_g304180.1 Contig3691.g28464 Shock protein 81-1 0.02 OrthoFinder
Sro1994_g309990.1 Contig4313.g32533 Shock protein 82 0.02 OrthoFinder
Sro323_g117320.1 Contig364.g4913 Protein HtpG 0.01 OrthoFinder
Sro812_g206010.1 Contig1219.g11461 Shock protein HSP 90 0.01 OrthoFinder
TP03G04890.1 No alias Heat shock protein Hsp90 family; Histidine kinase-, DNA... 0.02 OrthoFinder
TP05G05100.1 No alias Histidine kinase/HSP90-like ATPase; Heat shock protein... 0.03 OrthoFinder
TP06G04480.1 No alias Histidine kinase/HSP90-like ATPase; Heat shock protein... 0.01 OrthoFinder
Transcript_contig_58277 58277 Heat shock protein Hsp90 family; Histidine... 0.02 OrthoFinder
Vocar.0008s0288.1 32897224 Histidine kinase/HSP90-like ATPase; Heat shock protein... 0.03 OrthoFinder
XM_002508581.1 MICPUN_62210, 62210 Heat shock protein Hsp90 family; Histidine... 0.02 OrthoFinder
lcl|BLLF01000338.1_cds_GFH10699.1_5176 HaLaN_06058, GFH10699 Heat shock protein Hsp90 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499167.1_8120 KAA8499167 Endoplasmin-like 0.01 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499334.1_8287 KAA8499334 Heat shock protein 90-5, chloroplastic 0.02 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496413.1_142 KAA8496413 Heat shock protein 90-1 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006457 protein folding IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
InterPro domains Description Start Stop
IPR003594 HATPase_C 83 236
IPR001404 Hsp90_fam 241 805
No external refs found!