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Transcript_contig_54992 (54992)


Aliases : 54992

Description : Replication termination factor 2, RING-finger [Interproscan].


Gene families : OG_01_0001452 (OrthoFinder) Phylogenetic Tree(s): OG0001452_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_54992
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001264.16 tig00001264_g7872.t1 No description available 0.01 OrthoFinder
EOD29948 No alias Replication termination factor 2, RING-finger [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003847 1-alkyl-2-acetylglycerophosphocholine esterase activity IEP Enrichment
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005669 transcription factor TFIID complex IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Enrichment
BP GO:0016042 lipid catabolic process IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
InterPro domains Description Start Stop
IPR027799 Rtf2_RING-finger 78 353
No external refs found!