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  5. Transcript_contig_54956

Transcript_contig_54956 (54956)


Aliases : 54956

Description : SGNH hydrolase-type esterase domain [Interproscan].


Gene families : OG_01_0000181 (OrthoFinder) Phylogenetic Tree(s): OG0000181_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_54956
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
lcl|BLLF01000916.1_cds_GFH15890.1_10367 HaLaN_12210, GFH15890 Hypothetical protein 0.02 OrthoFinder
lcl|BLLF01006660.1_cds_GFH32451.1_26928 HaLaN_31673, GFH32451 Hypothetical protein 0.01 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61459.1_260 PRW61459 Hypothetical protein 0.04 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60465.1_4752 PRW60465 Expressed protein isoform B 0.03 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56397.1_9827 PRW56397 SGNH hydrolase-type esterase domain [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000012.1_cds_PRW45267.1_1972 PRW45267 Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
MF GO:0045735 nutrient reservoir activity IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
InterPro domains Description Start Stop
IPR013830 SGNH_hydro 101 306
No external refs found!