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  5. Transcript_contig_54935

Transcript_contig_54935 (54935)


Aliases : 54935

Description : Helicase-associated [Interproscan].


Gene families : OG_01_0000030 (OrthoFinder) Phylogenetic Tree(s): OG0000030_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_54935
Cluster HCCA: Cluster_252

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020553.111 tig00020553_g10597.t1 No description available 0.01 OrthoFinder
PTI_11G01850.1 No alias Helicase-associated [Interproscan]. 0.01 OrthoFinder
PTI_18G01480.1 No alias Helicase-associated [Interproscan]. 0.01 OrthoFinder
Sro1425_g271610.1 Contig1471.g13489 Helicase 0.01 OrthoFinder
Sro3351_g347090.1 Contig3507.g27172 Helicase 0.01 OrthoFinder
TP01G04770.1 No alias Helicase-associated [Interproscan]. 0.01 OrthoFinder
TP22G01370.1 No alias Helicase-associated [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0008033 tRNA processing IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0070070 proton-transporting V-type ATPase complex assembly IEP Enrichment
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Enrichment
BP GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly IEP Enrichment
InterPro domains Description Start Stop
IPR005114 Helicase_assoc 221 277
No external refs found!