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  5. Cpa|evm.model.tig00000704.48

Cpa|evm.model.tig00000704.48 (tig00000704_g3335.t1)


Aliases : tig00000704_g3335.t1

Description : Cell cycle.interphase.DNA replication.elongation.DNA-tracking platform.PCNA sliding clamp loader complex.RFC3 component


Gene families : OG_01_0002126 (OrthoFinder) Phylogenetic Tree(s): OG0002126_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000704.48
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
Cre16.g679950 30777561, RFC3 Cell cycle.interphase.DNA... 0.07 OrthoFinder
Cz09g17270.t1 No alias DNA polymerase III, delta subunit [Interproscan]. 0.02 OrthoFinder
EOD28604 No alias Putative clamp loading subunit replication factor C, 3 [Ensembl]. 0.07 OrthoFinder
OT_05G00160.1 No alias DNA polymerase III, delta subunit [Interproscan]. 0.03 OrthoFinder
Sro142_g066280.1 Contig226.g2677 Factor C subunit 3 0.04 OrthoFinder
TP03G06070.1 No alias Replication factor C, C-terminal; DNA polymerase III,... 0.02 OrthoFinder
Transcript_contig_1759 1759 DNA polymerase III, delta subunit [Interproscan]. 0.01 OrthoFinder
XM_002504091.1 MICPUN_61038, 61038 DNA polymerase III, delta subunit [Interproscan]. 0.06 OrthoFinder
XM_003060179.1 MicpuC2_18270, 18270 DNA polymerase III, delta subunit [Interproscan]. 0.05 OrthoFinder
lcl|BLLF01002740.1_cds_GFH25171.1_19648 HaLaN_23095, GFH25171 DNA replication factor C complex subunit 3 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003689 DNA clamp loader activity IEP Enrichment
MF GO:0003756 protein disulfide isomerase activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005663 DNA replication factor C complex IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
CC GO:0099080 supramolecular complex IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment

No InterPro domains available for this sequence

No external refs found!