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  5. Transcript_contig_54764

Transcript_contig_54764 (54764)


Aliases : 54764

Description : Hypothetical protein


Gene families : OG_01_0001634 (OrthoFinder) Phylogenetic Tree(s): OG0001634_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_54764
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021094.10 tig00021094_g18099.t1 Solute transport.carrier-mediated transport.CLC anion... 0.01 OrthoFinder
Cre01.g037150 30789001 Solute transport.carrier-mediated transport.CLC anion... 0.01 OrthoFinder
Sro114_g056240.1 Contig1482.g13524 Chloride channel protein CLC-e 0.02 OrthoFinder
Sro655_g182200.1 Contig3913.g29978 Chloride channel protein CLC-e 0.01 OrthoFinder
Vocar.0001s0714.1 32885876 Chloride channel, voltage gated [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000631.1_cds_GFH13597.1_8074 HaLaN_09519, GFH13597 Chloride channel protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003725 double-stranded RNA binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005542 folic acid binding IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
MF GO:0015078 proton transmembrane transporter activity IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0015297 antiporter activity IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0022853 active ion transmembrane transporter activity IEP Enrichment
MF GO:0031406 carboxylic acid binding IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0072341 modified amino acid binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment

No InterPro domains available for this sequence

No external refs found!