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  5. Cpa|evm.model.tig00000704.40

Cpa|evm.model.tig00000704.40 (tig00000704_g3327.t1)


Aliases : tig00000704_g3327.t1

No description available


Gene families : OG_01_0003336 (OrthoFinder) Phylogenetic Tree(s): OG0003336_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000704.40
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
Cre04.g217750 30791183 No description available 0.02 OrthoFinder
Dusal.0250s00007.1 33198093 WD40 repeat [Interproscan]. 0.03 OrthoFinder
EOD09437 No alias Hypothetical protein [Ensembl]. 0.01 OrthoFinder
EOD23794 No alias WD40 repeat; Forkhead-associated (FHA) domain [Interproscan]. 0.01 OrthoFinder
OT_08G01670.1 No alias WD40 repeat [Interproscan]. 0.03 OrthoFinder
PTI_22G02430.1 No alias WD40 repeat; Forkhead-associated (FHA) domain [Interproscan]. 0.01 OrthoFinder
Sro16_g011890.1 Contig916.g9626 WD repeat-containing protein 70 0.01 OrthoFinder
Transcript_contig_56539 56539 WD40 repeat [Interproscan]. 0.01 OrthoFinder
Vocar.0013s0267.1 32896210 WD40 repeat [Interproscan]. 0.01 OrthoFinder
XM_003058648.1 MicpuC2_33308, 33308 WD40 repeat [Interproscan]. 0.04 OrthoFinder
lcl|LHPG02000022.1_cds_PRW20712.1_5219 PRW20712 WD repeat-containing 70 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP Enrichment
BP GO:0000077 DNA damage checkpoint signaling IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0004357 glutamate-cysteine ligase activity IEP Enrichment
MF GO:0004784 superoxide dismutase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0005319 lipid transporter activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006302 double-strand break repair IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006621 protein retention in ER lumen IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006801 superoxide metabolic process IEP Enrichment
BP GO:0006869 lipid transport IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010564 regulation of cell cycle process IEP Enrichment
BP GO:0010948 negative regulation of cell cycle process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016881 acid-amino acid ligase activity IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030126 COPI vesicle coat IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
BP GO:0031570 DNA integrity checkpoint signaling IEP Enrichment
BP GO:0032507 maintenance of protein location in cell IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Enrichment
BP GO:0042770 signal transduction in response to DNA damage IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0045185 maintenance of protein location IEP Enrichment
BP GO:0045786 negative regulation of cell cycle IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
BP GO:0048523 negative regulation of cellular process IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051235 maintenance of location IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0051651 maintenance of location in cell IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0051726 regulation of cell cycle IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0072593 reactive oxygen species metabolic process IEP Enrichment
BP GO:0072595 maintenance of protein localization in organelle IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901987 regulation of cell cycle phase transition IEP Enrichment
BP GO:1901988 negative regulation of cell cycle phase transition IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 193 227
IPR001680 WD40_repeat 294 329
IPR001680 WD40_repeat 390 425
No external refs found!