Transcript_contig_54681 (54681)

Aliases : 54681

Description : Biotin carboxylase, C-terminal; Carboxyltransferase domain, subdomain C and D; Carboxyltransferase domain, subdomain A and B; Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain; Biotin/lipoyl attachment; Biotin carboxylase-like, N-terminal domain [Interproscan].

Gene families : OG_01_0000176 (OrthoFinder) Phylogenetic Tree(s): OG0000176_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Transcript_contig_54681
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
Sro434_g142010.1 Contig783.g8758 Propionyl-CoA carboxylase, biotin carboxylase and... 0.01 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497406.1_1135 KAA8497406 Propionyl-CoA carboxylase alpha chain, mitochondrial 0.01 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494651.1_3181 KAA8494651 Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005482 Biotin_COase_C 342 449
IPR003778 CT_A_B 481 757
IPR003833 CT_C_D 825 1049
IPR005479 CbamoylP_synth_lsu-like_ATP-bd 118 316
IPR000089 Biotin_lipoyl 1178 1236
IPR005481 BC-like_N 6 112
No external refs found!