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Transcript_contig_54670 (54670)


Aliases : 54670

Description : ATPase, dynein-related, AAA domain; ATPase RavA-like, AAA lid domain [Interproscan].


Gene families : OG_01_0001982 (OrthoFinder) Phylogenetic Tree(s): OG0001982_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_54670
Cluster HCCA: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
Cz05g25180.t1 No alias ATPase RavA-like, AAA lid domain; ATPase,... 0.02 OrthoFinder
XM_002503650.1 MICPUN_60277, 60277 ATPase RavA-like, AAA lid domain; ATPase,... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0006366 transcription by RNA polymerase II IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
InterPro domains Description Start Stop
IPR011704 ATPase_dyneun-rel_AAA 146 273
IPR041538 RavA-like_AAA_lid 344 414
No external refs found!