Transcript_contig_54635 (54635)


Aliases : 54635

Description : Zinc finger, UBP-type; Zinc finger, RING-type; BRCA1-associated 2 [Interproscan].


Gene families : OG_01_0002511 (OrthoFinder) Phylogenetic Tree(s): OG0002511_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_54635
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
lcl|VRMN01000002.1_cds_KAA8497208.1_937 KAA8497208 BRCA1-associated protein 0.01 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8492774.1_2510 KAA8492774 BRCA1-associated protein 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
MF GO:0003873 6-phosphofructo-2-kinase activity IEP Enrichment
MF GO:0003993 acid phosphatase activity IEP Enrichment
MF GO:0004806 triglyceride lipase activity IEP Enrichment
MF GO:0005337 nucleoside transmembrane transporter activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006000 fructose metabolic process IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008443 phosphofructokinase activity IEP Enrichment
BP GO:0015858 nucleoside transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
MF GO:0019200 carbohydrate kinase activity IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
MF GO:0098599 palmitoyl hydrolase activity IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
BP GO:1901264 carbohydrate derivative transport IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
BP GO:1901642 nucleoside transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR001841 Znf_RING 278 319
IPR011422 BRAP2 142 239
IPR001607 Znf_UBP 331 390
No external refs found!