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  5. Transcript_contig_54496

Transcript_contig_54496 (54496)


Aliases : 54496

Description : High mobility group box domain [Interproscan].


Gene families : OG_01_0000118 (OrthoFinder) Phylogenetic Tree(s): OG0000118_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_54496
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000984.29 tig00000984_g6005.t1 No description available 0.01 OrthoFinder
Dusal.0407s00007.1 33197894 High mobility group box domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP Enrichment
BP GO:0006865 amino acid transport IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
BP GO:1903825 organic acid transmembrane transport IEP Enrichment
BP GO:1905039 carboxylic acid transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR009071 HMG_box_dom 144 210
No external refs found!