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Transcript_contig_54404 (54404)


Aliases : 54404

Description : PDZ domain; Trypsin-like peptidase domain; Protease Do-like, PDZ domain [Interproscan].


Gene families : OG_01_0000337 (OrthoFinder) Phylogenetic Tree(s): OG0000337_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_54404
Cluster HCCA: Cluster_238

Target Alias Description ECC score Gene Family Method Actions
XM_003055653.1 MicpuC2_1808, 1808 Trypsin-like peptidase domain; Protease Do-like, PDZ... 0.02 OrthoFinder
lcl|BLLF01000121.1_cds_GFH07863.1_2340 HaLaN_02727, GFH07863 PDZ_3 domain-containing protein 0.02 OrthoFinder
lcl|LHPG02000013.1_cds_PRW44318.1_2382 PRW44318 Protease Do-like 9 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Enrichment
CC GO:0000808 origin recognition complex IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Enrichment
CC GO:0005664 nuclear origin of replication recognition complex IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
InterPro domains Description Start Stop
IPR001478 PDZ 393 475
IPR041517 DEGP_PDZ 482 629
No external refs found!