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Transcript_contig_54395 (54395)


Aliases : 54395

Description : Dynein heavy chain, domain-1; Dynein heavy chain region D6 P-loop domain; Dynein heavy chain, ATP-binding dynein motor region; Dynein heavy chain, AAA 5 extension domain; P-loop containing dynein motor region; Dynein heavy chain, hydrolytic ATP-binding dynein motor region; Dynein heavy chain, AAA module D4; Dynein heavy chain, coiled coil stalk; Dynein heavy chain, domain-2; Dynein heavy chain 3, AAA+ lid domain [Interproscan].


Gene families : OG_01_0000011 (OrthoFinder) Phylogenetic Tree(s): OG0000011_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_54395
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000076.78 tig00000076_g2377.t1 Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder
Cpa|evm.model.tig00000194.62 tig00000194_g14791.t1 Dynein-1-alpha heavy chain, flagellar inner arm I1... 0.02 OrthoFinder
Cpa|evm.model.tig00000194.63 tig00000194_g14791.t1 Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder
Cpa|evm.model.tig00000404.39 tig00000404_g400.t1 Cytoskeleton.microtubular network.Dynein... 0.01 OrthoFinder
Cpa|evm.model.tig00000955.33 tig00000955_g5810.t1 Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder
Cpa|evm.model.tig00001206.28 tig00001206_g7515.t1 Cytoskeleton.microtubular network.Dynein... 0.01 OrthoFinder
Cpa|evm.model.tig00020684.47 tig00020684_g12895.t1 Cytoskeleton.microtubular network.Dynein... 0.01 OrthoFinder
Cpa|evm.model.tig00021590.1 tig00021590_g22758.t1 Cytoplasmic dynein 2 heavy chain 1 OS=Chlamydomonas reinhardtii 0.03 OrthoFinder
Dusal.0298s00005.1 33203586 Dynein heavy chain region D6 P-loop domain; Dynein heavy... 0.01 OrthoFinder
TP07G04760.1 No alias Dynein heavy chain, AAA module D4; P-loop containing... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003777 microtubule motor activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0007018 microtubule-based movement IEA Interproscan
CC GO:0030286 dynein complex IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006606 protein import into nucleus IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
BP GO:0034504 protein localization to nucleus IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051170 import into nucleus IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
InterPro domains Description Start Stop
IPR035699 AAA_6 1670 1997
IPR035706 AAA_9 3339 3559
IPR041466 Dynein_AAA5_ext 2151 2276
IPR024743 Dynein_HC_stalk 2966 3308
IPR024317 Dynein_heavy_chain_D4_dom 2687 2949
IPR041589 DNAH3_AAA_lid_1 2499 2542
IPR004273 Dynein_heavy_D6_P-loop 3804 3920
IPR013594 Dynein_heavy_tail 22 594
IPR013602 Dynein_heavy_linker 1130 1536
No external refs found!