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  5. Transcript_contig_54380

Transcript_contig_54380 (54380)


Aliases : 54380

Description : Oxysterol-binding protein [Interproscan].


Gene families : OG_01_0003418 (OrthoFinder) Phylogenetic Tree(s): OG0003418_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_54380
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001388.10 tig00001388_g8580.t1 No description available 0.01 OrthoFinder
Cre09.g392750 30781244 Oxysterol-binding protein-related protein 3C... 0.01 OrthoFinder
Vocar.0023s0161.1 32883367 Oxysterol-binding protein [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01005458.1_cds_GFH31221.1_25698 HaLaN_30217, GFH31221 Oxysterol-binding protein [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59937.1_6188 PRW59937 Oxysterol-binding 9 0.02 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496701.1_430 KAA8496701 Oxysterol-binding protein 9 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015035 protein-disulfide reductase activity IEP Enrichment
MF GO:0015036 disulfide oxidoreductase activity IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
BP GO:0030328 prenylcysteine catabolic process IEP Enrichment
BP GO:0030329 prenylcysteine metabolic process IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
MF GO:0031419 cobalamin binding IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042219 cellular modified amino acid catabolic process IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055070 copper ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0061630 ubiquitin protein ligase activity IEP Enrichment
MF GO:0061659 ubiquitin-like protein ligase activity IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
CC GO:0098533 ATPase dependent transmembrane transport complex IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1904949 ATPase complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR000648 Oxysterol-bd 81 264
No external refs found!